Cluster: HRGMv2_4217_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- CGC Family ID: CGCFAM_02795
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4217_37 | HRGMv2_4217_37_7 | 8753 | 10501 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_4217_37 | HRGMv2_4217_37_8 | 10472 | 11986 | - | GH77 |
| TF | HRGMv2_4217_37 | HRGMv2_4217_37_9 | 12217 | 12657 | + | MarR |
| TC | HRGMv2_4217_37 | HRGMv2_4217_37_10 | 12733 | 14067 | + | 2.A.66.1.13 |
Gene ID: HRGMv2_4217_37_7
Type: TC
Location: 8753 - 10501 (+)
Type: TC
Location: 8753 - 10501 (+)
Gene ID: HRGMv2_4217_37_8
Type: CAZyme
Location: 10472 - 11986 (-)
Type: CAZyme
Location: 10472 - 11986 (-)
Gene ID: HRGMv2_4217_37_9
Type: TF
Location: 12217 - 12657 (+)
Type: TF
Location: 12217 - 12657 (+)
Gene ID: HRGMv2_4217_37_10
Type: TC
Location: 12733 - 14067 (+)
Type: TC
Location: 12733 - 14067 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.