dbCAN Logo

Cluster: HRGMv2_4217_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4217_30 HRGMv2_4217_30_2 775 2025 - 2.A.23.1.2
pfam HRGMv2_4217_30 HRGMv2_4217_30_3 2295 3128 + WYL
CAZyme HRGMv2_4217_30 HRGMv2_4217_30_4 3266 4345 + CE4
CAZyme HRGMv2_4217_30 HRGMv2_4217_30_5 4368 5150 + GT2
CAZyme HRGMv2_4217_30 HRGMv2_4217_30_6 5122 6141 + GT9
CAZyme HRGMv2_4217_30 HRGMv2_4217_30_7 6156 7178 + GT9
pfam HRGMv2_4217_30 HRGMv2_4217_30_8 7171 7863 + WaaY
CAZyme HRGMv2_4217_30 HRGMv2_4217_30_9 7874 8881 + GT9
Gene ID: HRGMv2_4217_30_2
Type: TC
Location: 775 - 2025 (-)
Gene ID: HRGMv2_4217_30_3
Type: pfam
Location: 2295 - 3128 (+)
Gene ID: HRGMv2_4217_30_4
Type: CAZyme
Location: 3266 - 4345 (+)
Gene ID: HRGMv2_4217_30_5
Type: CAZyme
Location: 4368 - 5150 (+)
Gene ID: HRGMv2_4217_30_6
Type: CAZyme
Location: 5122 - 6141 (+)
Gene ID: HRGMv2_4217_30_7
Type: CAZyme
Location: 6156 - 7178 (+)
Gene ID: HRGMv2_4217_30_8
Type: pfam
Location: 7171 - 7863 (+)
Gene ID: HRGMv2_4217_30_9
Type: CAZyme
Location: 7874 - 8881 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List