Cluster: HRGMv2_4217_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4217
- CGC Family ID: CGCFAM_10562
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4217_28 | HRGMv2_4217_28_19 | 22000 | 23223 | - | 2.A.41.2.11 |
| pfam | HRGMv2_4217_28 | HRGMv2_4217_28_20 | 23254 | 24033 | - | PNP_UDP_1 |
| STP | HRGMv2_4217_28 | HRGMv2_4217_28_21 | 24306 | 24809 | + | GAF |
| CAZyme | HRGMv2_4217_28 | HRGMv2_4217_28_22 | 24875 | 26995 | - | GH33 |
Gene ID: HRGMv2_4217_28_19
Type: TC
Location: 22000 - 23223 (-)
Type: TC
Location: 22000 - 23223 (-)
Gene ID: HRGMv2_4217_28_20
Type: pfam
Location: 23254 - 24033 (-)
Type: pfam
Location: 23254 - 24033 (-)
Gene ID: HRGMv2_4217_28_21
Type: STP
Location: 24306 - 24809 (+)
Type: STP
Location: 24306 - 24809 (+)
Gene ID: HRGMv2_4217_28_22
Type: CAZyme
Location: 24875 - 26995 (-)
Type: CAZyme
Location: 24875 - 26995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.