Cluster: HRGMv2_4217_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4217
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4217_17 | HRGMv2_4217_17_18 | 22111 | 23607 | - | GT83 |
| STP | HRGMv2_4217_17 | HRGMv2_4217_17_19 | 23698 | 25050 | - | HATPase_c | HisKA |
| TF | HRGMv2_4217_17 | HRGMv2_4217_17_20 | 25059 | 25733 | - | Trans_reg_C |
| CAZyme | HRGMv2_4217_17 | HRGMv2_4217_17_21 | 25949 | 26671 | + | GT2 |
| TC | HRGMv2_4217_17 | HRGMv2_4217_17_22 | 26664 | 26933 | + | 2.A.123.4.1 |
Gene ID: HRGMv2_4217_17_18
Type: CAZyme
Location: 22111 - 23607 (-)
Type: CAZyme
Location: 22111 - 23607 (-)
Gene ID: HRGMv2_4217_17_19
Type: STP
Location: 23698 - 25050 (-)
Type: STP
Location: 23698 - 25050 (-)
Gene ID: HRGMv2_4217_17_20
Type: TF
Location: 25059 - 25733 (-)
Type: TF
Location: 25059 - 25733 (-)
Gene ID: HRGMv2_4217_17_21
Type: CAZyme
Location: 25949 - 26671 (+)
Type: CAZyme
Location: 25949 - 26671 (+)
Gene ID: HRGMv2_4217_17_22
Type: TC
Location: 26664 - 26933 (+)
Type: TC
Location: 26664 - 26933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_B
Species
Fusobacterium_B sp019416865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.