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Cluster: HRGMv2_4216_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4216_2 HRGMv2_4216_2_212 202684 204273 - 3.A.1.5.25
TC HRGMv2_4216_2 HRGMv2_4216_2_213 204288 205889 - 3.A.1.5.25
TC HRGMv2_4216_2 HRGMv2_4216_2_214 205882 206817 - 3.A.1.5.19
TC HRGMv2_4216_2 HRGMv2_4216_2_215 206817 207926 - 3.A.1.5.19
TC HRGMv2_4216_2 HRGMv2_4216_2_216 207939 208898 - 3.A.1.5.2
TC HRGMv2_4216_2 HRGMv2_4216_2_217 208898 209869 - 3.A.1.5.2
NULL(UNKNOWN) HRGMv2_4216_2 HRGMv2_4216_2_218 210266 210916 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4216_2 HRGMv2_4216_2_219 210993 211367 + Rce1-like
CAZyme HRGMv2_4216_2 HRGMv2_4216_2_220 211348 212358 - GH170
TC HRGMv2_4216_2 HRGMv2_4216_2_221 212348 213745 - 4.A.1.2.7
Gene ID: HRGMv2_4216_2_212
Type: TC
Location: 202684 - 204273 (-)
Gene ID: HRGMv2_4216_2_213
Type: TC
Location: 204288 - 205889 (-)
Gene ID: HRGMv2_4216_2_214
Type: TC
Location: 205882 - 206817 (-)
Gene ID: HRGMv2_4216_2_215
Type: TC
Location: 206817 - 207926 (-)
Gene ID: HRGMv2_4216_2_216
Type: TC
Location: 207939 - 208898 (-)
Gene ID: HRGMv2_4216_2_217
Type: TC
Location: 208898 - 209869 (-)
Gene ID: HRGMv2_4216_2_218
Type:
Location: 210266 - 210916 (+)
Gene ID: HRGMv2_4216_2_219
Type: pfam
Location: 210993 - 211367 (+)
Gene ID: HRGMv2_4216_2_220
Type: CAZyme
Location: 211348 - 212358 (-)
Gene ID: HRGMv2_4216_2_221
Type: TC
Location: 212348 - 213745 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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