Cluster: HRGMv2_4216_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4216
- CGC Family ID: CGCFAM_10561
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4216_2 | HRGMv2_4216_2_145 | 138139 | 139287 | - | 2.A.36.2.1 |
| TC | HRGMv2_4216_2 | HRGMv2_4216_2_146 | 139507 | 140769 | - | 2.A.40.1.1 |
| NULL(UNKNOWN) | HRGMv2_4216_2 | HRGMv2_4216_2_147 | 141664 | 141897 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4216_2 | HRGMv2_4216_2_148 | 142042 | 142815 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4216_2 | HRGMv2_4216_2_149 | 142831 | 143928 | - | GT28 |
| TC | HRGMv2_4216_2 | HRGMv2_4216_2_150 | 144327 | 145034 | + | 2.A.88.8.1 |
Gene ID: HRGMv2_4216_2_145
Type: TC
Location: 138139 - 139287 (-)
Type: TC
Location: 138139 - 139287 (-)
Gene ID: HRGMv2_4216_2_146
Type: TC
Location: 139507 - 140769 (-)
Type: TC
Location: 139507 - 140769 (-)
Gene ID: HRGMv2_4216_2_147
Type:
Location: 141664 - 141897 (-)
Type:
Location: 141664 - 141897 (-)
Gene ID: HRGMv2_4216_2_148
Type:
Location: 142042 - 142815 (+)
Type:
Location: 142042 - 142815 (+)
Gene ID: HRGMv2_4216_2_149
Type: CAZyme
Location: 142831 - 143928 (-)
Type: CAZyme
Location: 142831 - 143928 (-)
Gene ID: HRGMv2_4216_2_150
Type: TC
Location: 144327 - 145034 (+)
Type: TC
Location: 144327 - 145034 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Sneathia
Species
Sneathia sp902494065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.