Cluster: HRGMv2_4216_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4216
- CGC Family ID: CGCFAM_02344
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4216_5 | HRGMv2_4216_5_89 | 95641 | 96906 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_4216_5 | HRGMv2_4216_5_90 | 96907 | 97650 | - | GT2 |
| pfam | HRGMv2_4216_5 | HRGMv2_4216_5_91 | 97643 | 98728 | - | Glyphos_transf |
| CAZyme | HRGMv2_4216_5 | HRGMv2_4216_5_92 | 98721 | 99548 | - | GT2 |
| CAZyme | HRGMv2_4216_5 | HRGMv2_4216_5_93 | 99550 | 100263 | - | GT32 |
| pfam | HRGMv2_4216_5 | HRGMv2_4216_5_94 | 100242 | 101579 | - | O-ag_pol_Wzy |
| CAZyme | HRGMv2_4216_5 | HRGMv2_4216_5_95 | 101566 | 102426 | - | GT2 |
Gene ID: HRGMv2_4216_5_89
Type: TC
Location: 95641 - 96906 (-)
Type: TC
Location: 95641 - 96906 (-)
Gene ID: HRGMv2_4216_5_90
Type: CAZyme
Location: 96907 - 97650 (-)
Type: CAZyme
Location: 96907 - 97650 (-)
Gene ID: HRGMv2_4216_5_91
Type: pfam
Location: 97643 - 98728 (-)
Type: pfam
Location: 97643 - 98728 (-)
Gene ID: HRGMv2_4216_5_92
Type: CAZyme
Location: 98721 - 99548 (-)
Type: CAZyme
Location: 98721 - 99548 (-)
Gene ID: HRGMv2_4216_5_93
Type: CAZyme
Location: 99550 - 100263 (-)
Type: CAZyme
Location: 99550 - 100263 (-)
Gene ID: HRGMv2_4216_5_94
Type: pfam
Location: 100242 - 101579 (-)
Type: pfam
Location: 100242 - 101579 (-)
Gene ID: HRGMv2_4216_5_95
Type: CAZyme
Location: 101566 - 102426 (-)
Type: CAZyme
Location: 101566 - 102426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Sneathia
Species
Sneathia sp902494065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.