Cluster: HRGMv2_4206_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4206
- CGC Family ID: CGCFAM_00006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4206_13 | HRGMv2_4206_13_26 | 24258 | 25835 | + | 2.A.36.3.3 |
| CAZyme | HRGMv2_4206_13 | HRGMv2_4206_13_27 | 25828 | 26982 | + | GT4 |
| pfam | HRGMv2_4206_13 | HRGMv2_4206_13_28 | 26983 | 27534 | + | Hexapep | Hexapep_2 |
| TC | HRGMv2_4206_13 | HRGMv2_4206_13_29 | 27542 | 28228 | + | 2.A.53.3.8 |
| TC | HRGMv2_4206_13 | HRGMv2_4206_13_30 | 28266 | 29867 | - | 2.A.53.3.8 |
Gene ID: HRGMv2_4206_13_26
Type: TC
Location: 24258 - 25835 (+)
Type: TC
Location: 24258 - 25835 (+)
Gene ID: HRGMv2_4206_13_27
Type: CAZyme
Location: 25828 - 26982 (+)
Type: CAZyme
Location: 25828 - 26982 (+)
Gene ID: HRGMv2_4206_13_28
Type: pfam
Location: 26983 - 27534 (+)
Type: pfam
Location: 26983 - 27534 (+)
Gene ID: HRGMv2_4206_13_29
Type: TC
Location: 27542 - 28228 (+)
Type: TC
Location: 27542 - 28228 (+)
Gene ID: HRGMv2_4206_13_30
Type: TC
Location: 28266 - 29867 (-)
Type: TC
Location: 28266 - 29867 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
JABCPE02
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.