dbCAN Logo

Cluster: HRGMv2_4206_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4206_23 HRGMv2_4206_23_9 7252 8907 + 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_4206_23 HRGMv2_4206_23_10 9071 9511 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4206_23 HRGMv2_4206_23_11 9545 10846 - 2.A.35.1.5
NULL(UNKNOWN) HRGMv2_4206_23 HRGMv2_4206_23_12 10846 11934 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4206_23 HRGMv2_4206_23_13 11942 12775 - GT2
pfam HRGMv2_4206_23 HRGMv2_4206_23_14 12843 13553 - SIMPL
sulfatase HRGMv2_4206_23 HRGMv2_4206_23_15 13613 16444 - S1_2
TC HRGMv2_4206_23 HRGMv2_4206_23_16 16505 17536 - 1.A.23.4.5
Gene ID: HRGMv2_4206_23_9
Type: TC
Location: 7252 - 8907 (+)
Gene ID: HRGMv2_4206_23_10
Type:
Location: 9071 - 9511 (+)
Gene ID: HRGMv2_4206_23_11
Type: TC
Location: 9545 - 10846 (-)
Gene ID: HRGMv2_4206_23_12
Type:
Location: 10846 - 11934 (-)
Gene ID: HRGMv2_4206_23_13
Type: CAZyme
Location: 11942 - 12775 (-)
Gene ID: HRGMv2_4206_23_14
Type: pfam
Location: 12843 - 13553 (-)
Gene ID: HRGMv2_4206_23_15
Type: sulfatase
Location: 13613 - 16444 (-)
Gene ID: HRGMv2_4206_23_16
Type: TC
Location: 16505 - 17536 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Flavobacteriales
→
Family
Weeksellaceae
→
Genus
JABCPE02
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List