Cluster: HRGMv2_4206_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4206
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4206_18 | HRGMv2_4206_18_11 | 9214 | 10455 | + | 9.B.146.1.3 |
| pfam | HRGMv2_4206_18 | HRGMv2_4206_18_12 | 10468 | 11013 | + | DUF6630 |
| pfam | HRGMv2_4206_18 | HRGMv2_4206_18_13 | 11025 | 12350 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_4206_18 | HRGMv2_4206_18_14 | 12366 | 13601 | + | 2.A.103.1.2 |
| CAZyme | HRGMv2_4206_18 | HRGMv2_4206_18_15 | 13632 | 14753 | + | GT28 |
Gene ID: HRGMv2_4206_18_11
Type: TC
Location: 9214 - 10455 (+)
Type: TC
Location: 9214 - 10455 (+)
Gene ID: HRGMv2_4206_18_12
Type: pfam
Location: 10468 - 11013 (+)
Type: pfam
Location: 10468 - 11013 (+)
Gene ID: HRGMv2_4206_18_13
Type: pfam
Location: 11025 - 12350 (+)
Type: pfam
Location: 11025 - 12350 (+)
Gene ID: HRGMv2_4206_18_14
Type: TC
Location: 12366 - 13601 (+)
Type: TC
Location: 12366 - 13601 (+)
Gene ID: HRGMv2_4206_18_15
Type: CAZyme
Location: 13632 - 14753 (+)
Type: CAZyme
Location: 13632 - 14753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
JABCPE02
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.