Cluster: HRGMv2_4206_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4206
- CGC Family ID: CGCFAM_01008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4206_2 | HRGMv2_4206_2_80 | 77551 | 78405 | + | GH25 |
| NULL(UNKNOWN) | HRGMv2_4206_2 | HRGMv2_4206_2_81 | 78491 | 79366 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4206_2 | HRGMv2_4206_2_82 | 79417 | 80481 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_4206_2 | HRGMv2_4206_2_83 | 80506 | 80826 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4206_2 | HRGMv2_4206_2_84 | 80811 | 81122 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4206_2 | HRGMv2_4206_2_85 | 81148 | 83340 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_4206_2_80
Type: CAZyme
Location: 77551 - 78405 (+)
Type: CAZyme
Location: 77551 - 78405 (+)
Gene ID: HRGMv2_4206_2_81
Type:
Location: 78491 - 79366 (-)
Type:
Location: 78491 - 79366 (-)
Gene ID: HRGMv2_4206_2_82
Type: CAZyme
Location: 79417 - 80481 (-)
Type: CAZyme
Location: 79417 - 80481 (-)
Gene ID: HRGMv2_4206_2_83
Type:
Location: 80506 - 80826 (-)
Type:
Location: 80506 - 80826 (-)
Gene ID: HRGMv2_4206_2_84
Type:
Location: 80811 - 81122 (-)
Type:
Location: 80811 - 81122 (-)
Gene ID: HRGMv2_4206_2_85
Type: TC
Location: 81148 - 83340 (-)
Type: TC
Location: 81148 - 83340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
JABCPE02
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.