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Cluster: HRGMv2_4205_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4205_5 HRGMv2_4205_5_35 39572 42061 + 9.B.144.1.4
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_36 42080 43366 + GT4
pfam HRGMv2_4205_5 HRGMv2_4205_5_37 43667 44377 - Pribosyltran
sulfatase HRGMv2_4205_5 HRGMv2_4205_5_38 44638 46290 + S1_2
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_39 46460 48034 + GH18
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_40 48078 49655 + GH18
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_41 49866 51173 + GH18
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_42 51277 52335 + GH18
CAZyme HRGMv2_4205_5 HRGMv2_4205_5_43 52332 53408 + GH18
Gene ID: HRGMv2_4205_5_35
Type: TC
Location: 39572 - 42061 (+)
Gene ID: HRGMv2_4205_5_36
Type: CAZyme
Location: 42080 - 43366 (+)
Gene ID: HRGMv2_4205_5_37
Type: pfam
Location: 43667 - 44377 (-)
Gene ID: HRGMv2_4205_5_38
Type: sulfatase
Location: 44638 - 46290 (+)
Gene ID: HRGMv2_4205_5_39
Type: CAZyme
Location: 46460 - 48034 (+)
Gene ID: HRGMv2_4205_5_40
Type: CAZyme
Location: 48078 - 49655 (+)
Gene ID: HRGMv2_4205_5_41
Type: CAZyme
Location: 49866 - 51173 (+)
Gene ID: HRGMv2_4205_5_42
Type: CAZyme
Location: 51277 - 52335 (+)
Gene ID: HRGMv2_4205_5_43
Type: CAZyme
Location: 52332 - 53408 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Flavobacteriales
→
Family
UBA1820
→
Genus
Merdimorpha
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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