Cluster: HRGMv2_4205_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4205
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4205_30 | HRGMv2_4205_30_1 | 361 | 2232 | - | 1.A.13.2.3 |
| pfam | HRGMv2_4205_30 | HRGMv2_4205_30_2 | 2447 | 3679 | - | FtsX | MacB_PCD |
| CAZyme | HRGMv2_4205_30 | HRGMv2_4205_30_3 | 3699 | 4898 | + | GH171 |
| CAZyme | HRGMv2_4205_30 | HRGMv2_4205_30_4 | 4920 | 6146 | + | GH171 |
| CAZyme | HRGMv2_4205_30 | HRGMv2_4205_30_5 | 6163 | 7326 | + | GH171 |
Gene ID: HRGMv2_4205_30_1
Type: TC
Location: 361 - 2232 (-)
Type: TC
Location: 361 - 2232 (-)
Gene ID: HRGMv2_4205_30_2
Type: pfam
Location: 2447 - 3679 (-)
Type: pfam
Location: 2447 - 3679 (-)
Gene ID: HRGMv2_4205_30_3
Type: CAZyme
Location: 3699 - 4898 (+)
Type: CAZyme
Location: 3699 - 4898 (+)
Gene ID: HRGMv2_4205_30_4
Type: CAZyme
Location: 4920 - 6146 (+)
Type: CAZyme
Location: 4920 - 6146 (+)
Gene ID: HRGMv2_4205_30_5
Type: CAZyme
Location: 6163 - 7326 (+)
Type: CAZyme
Location: 6163 - 7326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.