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Cluster: HRGMv2_4200_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4200_5 HRGMv2_4200_5_69 67649 68080 + 4.A.6.1.7
TC HRGMv2_4200_5 HRGMv2_4200_5_70 68135 68626 + 4.A.6.1.9
TC HRGMv2_4200_5 HRGMv2_4200_5_71 68708 69550 + 4.A.6.1.24
TC HRGMv2_4200_5 HRGMv2_4200_5_72 69553 70368 + 4.A.6.1.16
NULL(UNKNOWN) HRGMv2_4200_5 HRGMv2_4200_5_73 70439 70762 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4200_5 HRGMv2_4200_5_74 71296 72354 + GT4
TC HRGMv2_4200_5 HRGMv2_4200_5_75 72383 73429 + 4.D.2.1.5
CAZyme HRGMv2_4200_5 HRGMv2_4200_5_76 73426 75402 + GT4
Gene ID: HRGMv2_4200_5_69
Type: TC
Location: 67649 - 68080 (+)
Gene ID: HRGMv2_4200_5_70
Type: TC
Location: 68135 - 68626 (+)
Gene ID: HRGMv2_4200_5_71
Type: TC
Location: 68708 - 69550 (+)
Gene ID: HRGMv2_4200_5_72
Type: TC
Location: 69553 - 70368 (+)
Gene ID: HRGMv2_4200_5_73
Type:
Location: 70439 - 70762 (+)
Gene ID: HRGMv2_4200_5_74
Type: CAZyme
Location: 71296 - 72354 (+)
Gene ID: HRGMv2_4200_5_75
Type: TC
Location: 72383 - 73429 (+)
Gene ID: HRGMv2_4200_5_76
Type: CAZyme
Location: 73426 - 75402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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