Cluster: HRGMv2_4200_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_5 | HRGMv2_4200_5_40 | 40750 | 41682 | - | 2.A.69.4.3 |
| NULL(UNKNOWN) | HRGMv2_4200_5 | HRGMv2_4200_5_41 | 42096 | 42299 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4200_5 | HRGMv2_4200_5_42 | 42539 | 43246 | + | GntR |
| TC | HRGMv2_4200_5 | HRGMv2_4200_5_43 | 43410 | 45338 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_4200_5 | HRGMv2_4200_5_44 | 45361 | 47028 | + | GH13_29 |
Gene ID: HRGMv2_4200_5_40
Type: TC
Location: 40750 - 41682 (-)
Type: TC
Location: 40750 - 41682 (-)
Gene ID: HRGMv2_4200_5_41
Type:
Location: 42096 - 42299 (+)
Type:
Location: 42096 - 42299 (+)
Gene ID: HRGMv2_4200_5_42
Type: TF
Location: 42539 - 43246 (+)
Type: TF
Location: 42539 - 43246 (+)
Gene ID: HRGMv2_4200_5_43
Type: TC
Location: 43410 - 45338 (+)
Type: TC
Location: 43410 - 45338 (+)
Gene ID: HRGMv2_4200_5_44
Type: CAZyme
Location: 45361 - 47028 (+)
Type: CAZyme
Location: 45361 - 47028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.