Cluster: HRGMv2_4200_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_08807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_5 | HRGMv2_4200_5_22 | 21427 | 23406 | + | 3.A.16.1.1 |
| pfam | HRGMv2_4200_5 | HRGMv2_4200_5_23 | 23509 | 24372 | + | HSP33 |
| pfam | HRGMv2_4200_5 | HRGMv2_4200_5_24 | 24365 | 25330 | + | His_biosynth | Dus |
| CAZyme | HRGMv2_4200_5 | HRGMv2_4200_5_25 | 25404 | 27239 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_4200_5_22
Type: TC
Location: 21427 - 23406 (+)
Type: TC
Location: 21427 - 23406 (+)
Gene ID: HRGMv2_4200_5_23
Type: pfam
Location: 23509 - 24372 (+)
Type: pfam
Location: 23509 - 24372 (+)
Gene ID: HRGMv2_4200_5_24
Type: pfam
Location: 24365 - 25330 (+)
Type: pfam
Location: 24365 - 25330 (+)
Gene ID: HRGMv2_4200_5_25
Type: CAZyme
Location: 25404 - 27239 (+)
Type: CAZyme
Location: 25404 - 27239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.