Cluster: HRGMv2_4200_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4200_72 | HRGMv2_4200_72_1 | 138 | 2405 | - | GT35 |
| TF | HRGMv2_4200_72 | HRGMv2_4200_72_2 | 2492 | 2941 | - | HTH_3 |
| pfam | HRGMv2_4200_72 | HRGMv2_4200_72_3 | 3133 | 4140 | + | AsnA |
| TC | HRGMv2_4200_72 | HRGMv2_4200_72_4 | 4185 | 5216 | - | 3.A.1.112.9 |
Gene ID: HRGMv2_4200_72_1
Type: CAZyme
Location: 138 - 2405 (-)
Type: CAZyme
Location: 138 - 2405 (-)
Gene ID: HRGMv2_4200_72_2
Type: TF
Location: 2492 - 2941 (-)
Type: TF
Location: 2492 - 2941 (-)
Gene ID: HRGMv2_4200_72_3
Type: pfam
Location: 3133 - 4140 (+)
Type: pfam
Location: 3133 - 4140 (+)
Gene ID: HRGMv2_4200_72_4
Type: TC
Location: 4185 - 5216 (-)
Type: TC
Location: 4185 - 5216 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.