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Cluster: HRGMv2_4200_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4200_44 HRGMv2_4200_44_5 2624 4441 - 3.A.1.135.6
TC HRGMv2_4200_44 HRGMv2_4200_44_6 4431 6602 - 3.A.1.135.6
TF HRGMv2_4200_44 HRGMv2_4200_44_7 6599 7042 - MarR
CAZyme HRGMv2_4200_44 HRGMv2_4200_44_8 7139 9121 - GH31_1
NULL(UNKNOWN) HRGMv2_4200_44 HRGMv2_4200_44_9 9543 9899 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4200_44 HRGMv2_4200_44_10 10139 11317 + CE9
TF HRGMv2_4200_44 HRGMv2_4200_44_11 11349 12077 + HTH_DeoR
STP HRGMv2_4200_44 HRGMv2_4200_44_12 12188 13144 - PfkB
CAZyme HRGMv2_4200_44 HRGMv2_4200_44_13 13141 14559 - GH32
TC HRGMv2_4200_44 HRGMv2_4200_44_14 14571 16475 - 4.A.1.2.12
Gene ID: HRGMv2_4200_44_5
Type: TC
Location: 2624 - 4441 (-)
Gene ID: HRGMv2_4200_44_6
Type: TC
Location: 4431 - 6602 (-)
Gene ID: HRGMv2_4200_44_7
Type: TF
Location: 6599 - 7042 (-)
Gene ID: HRGMv2_4200_44_8
Type: CAZyme
Location: 7139 - 9121 (-)
Gene ID: HRGMv2_4200_44_9
Type:
Location: 9543 - 9899 (-)
Gene ID: HRGMv2_4200_44_10
Type: CAZyme
Location: 10139 - 11317 (+)
Gene ID: HRGMv2_4200_44_11
Type: TF
Location: 11349 - 12077 (+)
Gene ID: HRGMv2_4200_44_12
Type: STP
Location: 12188 - 13144 (-)
Gene ID: HRGMv2_4200_44_13
Type: CAZyme
Location: 13141 - 14559 (-)
Gene ID: HRGMv2_4200_44_14
Type: TC
Location: 14571 - 16475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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