Cluster: HRGMv2_4200_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4200_38 | HRGMv2_4200_38_3 | 1260 | 2729 | - | GH1 |
| pfam | HRGMv2_4200_38 | HRGMv2_4200_38_4 | 3278 | 4618 | + | Cas12f1-like_TNB |
| CAZyme | HRGMv2_4200_38 | HRGMv2_4200_38_5 | 4870 | 6327 | + | GH1 |
| TC | HRGMv2_4200_38 | HRGMv2_4200_38_6 | 6448 | 7908 | + | 4.C.1.1.14 |
Gene ID: HRGMv2_4200_38_3
Type: CAZyme
Location: 1260 - 2729 (-)
Type: CAZyme
Location: 1260 - 2729 (-)
Gene ID: HRGMv2_4200_38_4
Type: pfam
Location: 3278 - 4618 (+)
Type: pfam
Location: 3278 - 4618 (+)
Gene ID: HRGMv2_4200_38_5
Type: CAZyme
Location: 4870 - 6327 (+)
Type: CAZyme
Location: 4870 - 6327 (+)
Gene ID: HRGMv2_4200_38_6
Type: TC
Location: 6448 - 7908 (+)
Type: TC
Location: 6448 - 7908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.