Cluster: HRGMv2_4200_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_10557
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4200_35 | HRGMv2_4200_35_12 | 11401 | 12492 | - | GT28 |
| peptidase | HRGMv2_4200_35 | HRGMv2_4200_35_13 | 12512 | 13243 | - | C60.002 |
| sulfatase | HRGMv2_4200_35 | HRGMv2_4200_35_14 | 13329 | 14045 | - | S1_9 |
| TC | HRGMv2_4200_35 | HRGMv2_4200_35_15 | 14133 | 14606 | - | 4.A.6.1.5 |
| TF | HRGMv2_4200_35 | HRGMv2_4200_35_16 | 14875 | 16017 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4200_35 | HRGMv2_4200_35_17 | 16039 | 16443 | - | 4.A.6.1.14 |
Gene ID: HRGMv2_4200_35_12
Type: CAZyme
Location: 11401 - 12492 (-)
Type: CAZyme
Location: 11401 - 12492 (-)
Gene ID: HRGMv2_4200_35_13
Type: peptidase
Location: 12512 - 13243 (-)
Type: peptidase
Location: 12512 - 13243 (-)
Gene ID: HRGMv2_4200_35_14
Type: sulfatase
Location: 13329 - 14045 (-)
Type: sulfatase
Location: 13329 - 14045 (-)
Gene ID: HRGMv2_4200_35_15
Type: TC
Location: 14133 - 14606 (-)
Type: TC
Location: 14133 - 14606 (-)
Gene ID: HRGMv2_4200_35_16
Type: TF
Location: 14875 - 16017 (+)
Type: TF
Location: 14875 - 16017 (+)
Gene ID: HRGMv2_4200_35_17
Type: TC
Location: 16039 - 16443 (-)
Type: TC
Location: 16039 - 16443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.