Cluster: HRGMv2_4200_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4200_34 | HRGMv2_4200_34_5 | 3297 | 4343 | + | GH20 |
| pfam | HRGMv2_4200_34 | HRGMv2_4200_34_6 | 4405 | 4824 | + | DUF2871 |
| TF | HRGMv2_4200_34 | HRGMv2_4200_34_7 | 4852 | 5283 | - | 0040517 |
| TC | HRGMv2_4200_34 | HRGMv2_4200_34_8 | 5379 | 7280 | - | 3.A.16.1.2 |
Gene ID: HRGMv2_4200_34_5
Type: CAZyme
Location: 3297 - 4343 (+)
Type: CAZyme
Location: 3297 - 4343 (+)
Gene ID: HRGMv2_4200_34_6
Type: pfam
Location: 4405 - 4824 (+)
Type: pfam
Location: 4405 - 4824 (+)
Gene ID: HRGMv2_4200_34_7
Type: TF
Location: 4852 - 5283 (-)
Type: TF
Location: 4852 - 5283 (-)
Gene ID: HRGMv2_4200_34_8
Type: TC
Location: 5379 - 7280 (-)
Type: TC
Location: 5379 - 7280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.