Cluster: HRGMv2_4200_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_00199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_30 | HRGMv2_4200_30_1 | 88 | 981 | - | 3.A.1.1.31 |
| TC | HRGMv2_4200_30 | HRGMv2_4200_30_2 | 988 | 1839 | - | 3.A.1.1.28 |
| TC | HRGMv2_4200_30 | HRGMv2_4200_30_3 | 1836 | 2711 | - | 3.A.1.1.28 |
| TC | HRGMv2_4200_30 | HRGMv2_4200_30_4 | 2713 | 3981 | - | 3.A.1.1.28 |
| TF | HRGMv2_4200_30 | HRGMv2_4200_30_5 | 4140 | 4991 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4200_30 | HRGMv2_4200_30_6 | 5080 | 7287 | + | GH36 |
Gene ID: HRGMv2_4200_30_1
Type: TC
Location: 88 - 981 (-)
Type: TC
Location: 88 - 981 (-)
Gene ID: HRGMv2_4200_30_2
Type: TC
Location: 988 - 1839 (-)
Type: TC
Location: 988 - 1839 (-)
Gene ID: HRGMv2_4200_30_3
Type: TC
Location: 1836 - 2711 (-)
Type: TC
Location: 1836 - 2711 (-)
Gene ID: HRGMv2_4200_30_4
Type: TC
Location: 2713 - 3981 (-)
Type: TC
Location: 2713 - 3981 (-)
Gene ID: HRGMv2_4200_30_5
Type: TF
Location: 4140 - 4991 (+)
Type: TF
Location: 4140 - 4991 (+)
Gene ID: HRGMv2_4200_30_6
Type: CAZyme
Location: 5080 - 7287 (+)
Type: CAZyme
Location: 5080 - 7287 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.