Cluster: HRGMv2_4200_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_24 | HRGMv2_4200_24_35 | 33230 | 33724 | + | 4.A.1.1.14 |
| pfam | HRGMv2_4200_24 | HRGMv2_4200_24_36 | 33737 | 34573 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_4200_24 | HRGMv2_4200_24_37 | 34643 | 36076 | + | 4.A.1.2.3 |
| CAZyme | HRGMv2_4200_24 | HRGMv2_4200_24_38 | 36154 | 37338 | + | GH170 |
Gene ID: HRGMv2_4200_24_35
Type: TC
Location: 33230 - 33724 (+)
Type: TC
Location: 33230 - 33724 (+)
Gene ID: HRGMv2_4200_24_36
Type: pfam
Location: 33737 - 34573 (+)
Type: pfam
Location: 33737 - 34573 (+)
Gene ID: HRGMv2_4200_24_37
Type: TC
Location: 34643 - 36076 (+)
Type: TC
Location: 34643 - 36076 (+)
Gene ID: HRGMv2_4200_24_38
Type: CAZyme
Location: 36154 - 37338 (+)
Type: CAZyme
Location: 36154 - 37338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.