Cluster: HRGMv2_4200_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_04289
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_24 | HRGMv2_4200_24_17 | 16863 | 18221 | - | 2.A.22.5.3 |
| pfam | HRGMv2_4200_24 | HRGMv2_4200_24_18 | 18318 | 19154 | + | S6PP | Hydrolase_3 |
| NULL(UNKNOWN) | HRGMv2_4200_24 | HRGMv2_4200_24_19 | 19346 | 19657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4200_24 | HRGMv2_4200_24_20 | 19654 | 21009 | - | GH1 |
| TC | HRGMv2_4200_24 | HRGMv2_4200_24_21 | 21028 | 22869 | - | 4.A.1.2.11 |
Gene ID: HRGMv2_4200_24_17
Type: TC
Location: 16863 - 18221 (-)
Type: TC
Location: 16863 - 18221 (-)
Gene ID: HRGMv2_4200_24_18
Type: pfam
Location: 18318 - 19154 (+)
Type: pfam
Location: 18318 - 19154 (+)
Gene ID: HRGMv2_4200_24_19
Type:
Location: 19346 - 19657 (-)
Type:
Location: 19346 - 19657 (-)
Gene ID: HRGMv2_4200_24_20
Type: CAZyme
Location: 19654 - 21009 (-)
Type: CAZyme
Location: 19654 - 21009 (-)
Gene ID: HRGMv2_4200_24_21
Type: TC
Location: 21028 - 22869 (-)
Type: TC
Location: 21028 - 22869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.