Cluster: HRGMv2_4200_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4200_23 | HRGMv2_4200_23_13 | 10635 | 12029 | - | GH4 |
| sulfatase | HRGMv2_4200_23 | HRGMv2_4200_23_14 | 12134 | 13162 | - | S1_6 |
| TC | HRGMv2_4200_23 | HRGMv2_4200_23_15 | 13253 | 14284 | + | 8.A.5.1.4 |
| pfam | HRGMv2_4200_23 | HRGMv2_4200_23_16 | 14323 | 15444 | - | DHHW | ALGX |
| TC | HRGMv2_4200_23 | HRGMv2_4200_23_17 | 15454 | 16806 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_4200_23_13
Type: CAZyme
Location: 10635 - 12029 (-)
Type: CAZyme
Location: 10635 - 12029 (-)
Gene ID: HRGMv2_4200_23_14
Type: sulfatase
Location: 12134 - 13162 (-)
Type: sulfatase
Location: 12134 - 13162 (-)
Gene ID: HRGMv2_4200_23_15
Type: TC
Location: 13253 - 14284 (+)
Type: TC
Location: 13253 - 14284 (+)
Gene ID: HRGMv2_4200_23_16
Type: pfam
Location: 14323 - 15444 (-)
Type: pfam
Location: 14323 - 15444 (-)
Gene ID: HRGMv2_4200_23_17
Type: TC
Location: 15454 - 16806 (-)
Type: TC
Location: 15454 - 16806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.