Cluster: HRGMv2_4200_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_00575
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_18 | HRGMv2_4200_18_17 | 14851 | 16242 | + | 4.A.3.2.4 |
| NULL(UNKNOWN) | HRGMv2_4200_18 | HRGMv2_4200_18_18 | 16308 | 16556 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4200_18 | HRGMv2_4200_18_19 | 16570 | 17655 | + | GH170 |
Gene ID: HRGMv2_4200_18_17
Type: TC
Location: 14851 - 16242 (+)
Type: TC
Location: 14851 - 16242 (+)
Gene ID: HRGMv2_4200_18_18
Type:
Location: 16308 - 16556 (+)
Type:
Location: 16308 - 16556 (+)
Gene ID: HRGMv2_4200_18_19
Type: CAZyme
Location: 16570 - 17655 (+)
Type: CAZyme
Location: 16570 - 17655 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.