Cluster: HRGMv2_4200_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4200
- CGC Family ID: CGCFAM_01180
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4200_10 | HRGMv2_4200_10_48 | 63260 | 64591 | + | 4.A.3.2.8 |
| pfam | HRGMv2_4200_10 | HRGMv2_4200_10_49 | 64569 | 65009 | + | DUF3284 |
| CAZyme | HRGMv2_4200_10 | HRGMv2_4200_10_50 | 65000 | 67213 | + | GH36 |
| CAZyme | HRGMv2_4200_10 | HRGMv2_4200_10_51 | 67210 | 68628 | + | GH1 |
Gene ID: HRGMv2_4200_10_48
Type: TC
Location: 63260 - 64591 (+)
Type: TC
Location: 63260 - 64591 (+)
Gene ID: HRGMv2_4200_10_49
Type: pfam
Location: 64569 - 65009 (+)
Type: pfam
Location: 64569 - 65009 (+)
Gene ID: HRGMv2_4200_10_50
Type: CAZyme
Location: 65000 - 67213 (+)
Type: CAZyme
Location: 65000 - 67213 (+)
Gene ID: HRGMv2_4200_10_51
Type: CAZyme
Location: 67210 - 68628 (+)
Type: CAZyme
Location: 67210 - 68628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Dubosiella
Species
Dubosiella sp910585105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.