Cluster: HRGMv2_4198_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4198
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4198_10 | HRGMv2_4198_10_19 | 18058 | 19371 | - | 2.A.40.1.1 |
| pfam | HRGMv2_4198_10 | HRGMv2_4198_10_20 | 19597 | 20364 | - | TauE |
| STP | HRGMv2_4198_10 | HRGMv2_4198_10_21 | 20553 | 21440 | - | SIS |
| TC | HRGMv2_4198_10 | HRGMv2_4198_10_22 | 21531 | 22802 | + | 2.A.23.4.1 |
| TF | HRGMv2_4198_10 | HRGMv2_4198_10_23 | 22817 | 23281 | - | HTH_3 |
| pfam | HRGMv2_4198_10 | HRGMv2_4198_10_24 | 23840 | 24154 | + | PTS_IIA |
| CAZyme | HRGMv2_4198_10 | HRGMv2_4198_10_25 | 24255 | 25709 | + | GH1 |
Gene ID: HRGMv2_4198_10_19
Type: TC
Location: 18058 - 19371 (-)
Type: TC
Location: 18058 - 19371 (-)
Gene ID: HRGMv2_4198_10_20
Type: pfam
Location: 19597 - 20364 (-)
Type: pfam
Location: 19597 - 20364 (-)
Gene ID: HRGMv2_4198_10_21
Type: STP
Location: 20553 - 21440 (-)
Type: STP
Location: 20553 - 21440 (-)
Gene ID: HRGMv2_4198_10_22
Type: TC
Location: 21531 - 22802 (+)
Type: TC
Location: 21531 - 22802 (+)
Gene ID: HRGMv2_4198_10_23
Type: TF
Location: 22817 - 23281 (-)
Type: TF
Location: 22817 - 23281 (-)
Gene ID: HRGMv2_4198_10_24
Type: pfam
Location: 23840 - 24154 (+)
Type: pfam
Location: 23840 - 24154 (+)
Gene ID: HRGMv2_4198_10_25
Type: CAZyme
Location: 24255 - 25709 (+)
Type: CAZyme
Location: 24255 - 25709 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalibaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.