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Cluster: HRGMv2_4198_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4198_9 HRGMv2_4198_9_11 9735 10976 - 2.A.49.9.4
TC HRGMv2_4198_9 HRGMv2_4198_9_12 11076 13673 + 3.A.1.122.13
pfam HRGMv2_4198_9 HRGMv2_4198_9_13 13831 14970 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4198_9 HRGMv2_4198_9_14 14974 16089 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4198_9 HRGMv2_4198_9_15 16089 17531 + GT5
pfam HRGMv2_4198_9 HRGMv2_4198_9_16 17528 17953 + 2-thiour_desulf
TC HRGMv2_4198_9 HRGMv2_4198_9_17 18011 18277 + 8.A.8.1.3
Gene ID: HRGMv2_4198_9_11
Type: TC
Location: 9735 - 10976 (-)
Gene ID: HRGMv2_4198_9_12
Type: TC
Location: 11076 - 13673 (+)
Gene ID: HRGMv2_4198_9_13
Type: pfam
Location: 13831 - 14970 (+)
Gene ID: HRGMv2_4198_9_14
Type: pfam
Location: 14974 - 16089 (+)
Gene ID: HRGMv2_4198_9_15
Type: CAZyme
Location: 16089 - 17531 (+)
Gene ID: HRGMv2_4198_9_16
Type: pfam
Location: 17528 - 17953 (+)
Gene ID: HRGMv2_4198_9_17
Type: TC
Location: 18011 - 18277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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