Cluster: HRGMv2_4198_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4198
- CGC Family ID: CGCFAM_00503
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4198_8 | HRGMv2_4198_8_18 | 17908 | 18738 | + | 3.A.1.104.1 |
| TC | HRGMv2_4198_8 | HRGMv2_4198_8_19 | 18747 | 19568 | + | 3.A.1.104.2 |
| pfam | HRGMv2_4198_8 | HRGMv2_4198_8_20 | 19565 | 20338 | + | GDPD |
| pfam | HRGMv2_4198_8 | HRGMv2_4198_8_21 | 20335 | 20745 | + | CTP_transf_like |
| CAZyme | HRGMv2_4198_8 | HRGMv2_4198_8_22 | 20745 | 23183 | + | GT4 |
| TC | HRGMv2_4198_8 | HRGMv2_4198_8_23 | 23180 | 24175 | + | 9.B.97.6.1 |
Gene ID: HRGMv2_4198_8_18
Type: TC
Location: 17908 - 18738 (+)
Type: TC
Location: 17908 - 18738 (+)
Gene ID: HRGMv2_4198_8_19
Type: TC
Location: 18747 - 19568 (+)
Type: TC
Location: 18747 - 19568 (+)
Gene ID: HRGMv2_4198_8_20
Type: pfam
Location: 19565 - 20338 (+)
Type: pfam
Location: 19565 - 20338 (+)
Gene ID: HRGMv2_4198_8_21
Type: pfam
Location: 20335 - 20745 (+)
Type: pfam
Location: 20335 - 20745 (+)
Gene ID: HRGMv2_4198_8_22
Type: CAZyme
Location: 20745 - 23183 (+)
Type: CAZyme
Location: 20745 - 23183 (+)
Gene ID: HRGMv2_4198_8_23
Type: TC
Location: 23180 - 24175 (+)
Type: TC
Location: 23180 - 24175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalibaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.