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Cluster: HRGMv2_4198_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4198_37 HRGMv2_4198_37_8 4633 5061 + 4.A.6.1.7
TC HRGMv2_4198_37 HRGMv2_4198_37_9 5101 5589 + 4.A.6.1.9
pfam HRGMv2_4198_37 HRGMv2_4198_37_10 5649 6482 + EII-Sor
TC HRGMv2_4198_37 HRGMv2_4198_37_11 6485 7300 + 4.A.6.1.16
NULL(UNKNOWN) HRGMv2_4198_37 HRGMv2_4198_37_12 7366 7686 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4198_37 HRGMv2_4198_37_13 7923 9005 + GT4
TC HRGMv2_4198_37 HRGMv2_4198_37_14 9002 10102 + 4.D.2.1.5
CAZyme HRGMv2_4198_37 HRGMv2_4198_37_15 10099 12051 + GT4
Gene ID: HRGMv2_4198_37_8
Type: TC
Location: 4633 - 5061 (+)
Gene ID: HRGMv2_4198_37_9
Type: TC
Location: 5101 - 5589 (+)
Gene ID: HRGMv2_4198_37_10
Type: pfam
Location: 5649 - 6482 (+)
Gene ID: HRGMv2_4198_37_11
Type: TC
Location: 6485 - 7300 (+)
Gene ID: HRGMv2_4198_37_12
Type:
Location: 7366 - 7686 (+)
Gene ID: HRGMv2_4198_37_13
Type: CAZyme
Location: 7923 - 9005 (+)
Gene ID: HRGMv2_4198_37_14
Type: TC
Location: 9002 - 10102 (+)
Gene ID: HRGMv2_4198_37_15
Type: CAZyme
Location: 10099 - 12051 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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