Cluster: HRGMv2_4198_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4198
- CGC Family ID: CGCFAM_10556
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4198_19 | HRGMv2_4198_19_11 | 7998 | 10574 | - | 3.A.9.1.2 |
| pfam | HRGMv2_4198_19 | HRGMv2_4198_19_12 | 10679 | 11521 | - | Endonuclea_NS_2 |
| CAZyme | HRGMv2_4198_19 | HRGMv2_4198_19_13 | 11605 | 12750 | - | CE9 |
| TC | HRGMv2_4198_19 | HRGMv2_4198_19_14 | 12792 | 13643 | - | 2.A.115.1.1 |
| pfam | HRGMv2_4198_19 | HRGMv2_4198_19_15 | 13640 | 14965 | - | Methyltr_RsmB-F | Methyltranf_PUA | Methyltr_RsmF_N |
| STP | HRGMv2_4198_19 | HRGMv2_4198_19_16 | 14983 | 15837 | - | Peptidase_M23 |
| TC | HRGMv2_4198_19 | HRGMv2_4198_19_17 | 15870 | 17075 | - | 9.B.67.1.2 |
Gene ID: HRGMv2_4198_19_11
Type: TC
Location: 7998 - 10574 (-)
Type: TC
Location: 7998 - 10574 (-)
Gene ID: HRGMv2_4198_19_12
Type: pfam
Location: 10679 - 11521 (-)
Type: pfam
Location: 10679 - 11521 (-)
Gene ID: HRGMv2_4198_19_13
Type: CAZyme
Location: 11605 - 12750 (-)
Type: CAZyme
Location: 11605 - 12750 (-)
Gene ID: HRGMv2_4198_19_14
Type: TC
Location: 12792 - 13643 (-)
Type: TC
Location: 12792 - 13643 (-)
Gene ID: HRGMv2_4198_19_15
Type: pfam
Location: 13640 - 14965 (-)
Type: pfam
Location: 13640 - 14965 (-)
Gene ID: HRGMv2_4198_19_16
Type: STP
Location: 14983 - 15837 (-)
Type: STP
Location: 14983 - 15837 (-)
Gene ID: HRGMv2_4198_19_17
Type: TC
Location: 15870 - 17075 (-)
Type: TC
Location: 15870 - 17075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalibaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.