Cluster: HRGMv2_4198_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_4198
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4198_17 | HRGMv2_4198_17_39 | 36788 | 37102 | - | 4.A.3.2.2 |
| TC | HRGMv2_4198_17 | HRGMv2_4198_17_40 | 37141 | 38490 | - | 4.A.3.2.9 |
| CAZyme | HRGMv2_4198_17 | HRGMv2_4198_17_41 | 38509 | 39927 | - | GH1 |
| TF | HRGMv2_4198_17 | HRGMv2_4198_17_42 | 40234 | 40947 | + | GntR |
| pfam | HRGMv2_4198_17 | HRGMv2_4198_17_43 | 41064 | 41375 | + | PTS_IIA |
| TC | HRGMv2_4198_17 | HRGMv2_4198_17_44 | 41471 | 41866 | + | 1.A.22.1.1 |
Gene ID: HRGMv2_4198_17_39
Type: TC
Location: 36788 - 37102 (-)
Type: TC
Location: 36788 - 37102 (-)
Gene ID: HRGMv2_4198_17_40
Type: TC
Location: 37141 - 38490 (-)
Type: TC
Location: 37141 - 38490 (-)
Gene ID: HRGMv2_4198_17_41
Type: CAZyme
Location: 38509 - 39927 (-)
Type: CAZyme
Location: 38509 - 39927 (-)
Gene ID: HRGMv2_4198_17_42
Type: TF
Location: 40234 - 40947 (+)
Type: TF
Location: 40234 - 40947 (+)
Gene ID: HRGMv2_4198_17_43
Type: pfam
Location: 41064 - 41375 (+)
Type: pfam
Location: 41064 - 41375 (+)
Gene ID: HRGMv2_4198_17_44
Type: TC
Location: 41471 - 41866 (+)
Type: TC
Location: 41471 - 41866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalibaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.