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Cluster: HRGMv2_4198_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4198_14 HRGMv2_4198_14_36 35046 36392 - 2.A.66.1.32
TC HRGMv2_4198_14 HRGMv2_4198_14_37 36494 37564 - 4.A.1.2.6
TF HRGMv2_4198_14 HRGMv2_4198_14_38 37742 38815 - 0043095
pfam HRGMv2_4198_14 HRGMv2_4198_14_39 39355 40053 - Hydrolase | Hydrolase_like | HAD_2
TC HRGMv2_4198_14 HRGMv2_4198_14_40 40076 41671 - 2.A.58.2.2
pfam HRGMv2_4198_14 HRGMv2_4198_14_41 41776 43362 - Phosphodiest | Metalloenzyme | iPGM_N
CAZyme HRGMv2_4198_14 HRGMv2_4198_14_42 43483 44655 - GH170
pfam HRGMv2_4198_14 HRGMv2_4198_14_43 44753 45073 - Thioredoxin | Thioredoxin_2 | Thioredoxin_3 | TraF | Thioredoxin_9
TC HRGMv2_4198_14 HRGMv2_4198_14_44 45148 45894 - 3.A.1.3.20
TC HRGMv2_4198_14 HRGMv2_4198_14_45 45904 46626 - 3.A.1.3.20
TC HRGMv2_4198_14 HRGMv2_4198_14_46 46630 47460 - 3.A.1.3.20
Gene ID: HRGMv2_4198_14_36
Type: TC
Location: 35046 - 36392 (-)
Gene ID: HRGMv2_4198_14_37
Type: TC
Location: 36494 - 37564 (-)
Gene ID: HRGMv2_4198_14_38
Type: TF
Location: 37742 - 38815 (-)
Gene ID: HRGMv2_4198_14_39
Type: pfam
Location: 39355 - 40053 (-)
Gene ID: HRGMv2_4198_14_40
Type: TC
Location: 40076 - 41671 (-)
Gene ID: HRGMv2_4198_14_41
Type: pfam
Location: 41776 - 43362 (-)
Gene ID: HRGMv2_4198_14_42
Type: CAZyme
Location: 43483 - 44655 (-)
Gene ID: HRGMv2_4198_14_43
Type: pfam
Location: 44753 - 45073 (-)
Gene ID: HRGMv2_4198_14_44
Type: TC
Location: 45148 - 45894 (-)
Gene ID: HRGMv2_4198_14_45
Type: TC
Location: 45904 - 46626 (-)
Gene ID: HRGMv2_4198_14_46
Type: TC
Location: 46630 - 47460 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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