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Cluster: HRGMv2_4198_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4198_12 HRGMv2_4198_12_4 5204 6700 + 2.A.114.1.4
NULL(UNKNOWN) HRGMv2_4198_12 HRGMv2_4198_12_5 6767 7171 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4198_12 HRGMv2_4198_12_6 7329 8759 + CE4
TC HRGMv2_4198_12 HRGMv2_4198_12_7 9057 10067 - 8.A.5.1.3
pfam HRGMv2_4198_12 HRGMv2_4198_12_8 10177 11406 + GARS_A | ATP-grasp_3 | CPSase_L_D2 | GARS_C | GARS_N
pfam HRGMv2_4198_12 HRGMv2_4198_12_9 11406 13073 + FTHFS
TC HRGMv2_4198_12 HRGMv2_4198_12_10 13139 14275 + 2.A.86.1.11
Gene ID: HRGMv2_4198_12_4
Type: TC
Location: 5204 - 6700 (+)
Gene ID: HRGMv2_4198_12_5
Type:
Location: 6767 - 7171 (-)
Gene ID: HRGMv2_4198_12_6
Type: CAZyme
Location: 7329 - 8759 (+)
Gene ID: HRGMv2_4198_12_7
Type: TC
Location: 9057 - 10067 (-)
Gene ID: HRGMv2_4198_12_8
Type: pfam
Location: 10177 - 11406 (+)
Gene ID: HRGMv2_4198_12_9
Type: pfam
Location: 11406 - 13073 (+)
Gene ID: HRGMv2_4198_12_10
Type: TC
Location: 13139 - 14275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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