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Cluster: HRGMv2_4197_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4197_7 HRGMv2_4197_7_13 12079 12600 + 3.A.7.19.1
pfam HRGMv2_4197_7 HRGMv2_4197_7_14 12619 12849 + Ribosomal_S18
NULL(UNKNOWN) HRGMv2_4197_7 HRGMv2_4197_7_15 12891 13160 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4197_7 HRGMv2_4197_7_16 13445 14809 + 2.A.40.7.2
STP HRGMv2_4197_7 HRGMv2_4197_7_17 14892 15548 + PfkB
pfam HRGMv2_4197_7 HRGMv2_4197_7_18 15536 16696 + tRNA-synt_2c | DHHA1 | tRNA_SAD
CAZyme HRGMv2_4197_7 HRGMv2_4197_7_19 16828 18657 + CBM48 | GH13_9
CAZyme HRGMv2_4197_7 HRGMv2_4197_7_20 18672 21083 + GT35
CAZyme HRGMv2_4197_7 HRGMv2_4197_7_21 21119 23239 + GH13_14
TC HRGMv2_4197_7 HRGMv2_4197_7_22 23243 25546 + 3.A.5.1.3
Gene ID: HRGMv2_4197_7_13
Type: TC
Location: 12079 - 12600 (+)
Gene ID: HRGMv2_4197_7_14
Type: pfam
Location: 12619 - 12849 (+)
Gene ID: HRGMv2_4197_7_15
Type:
Location: 12891 - 13160 (+)
Gene ID: HRGMv2_4197_7_16
Type: TC
Location: 13445 - 14809 (+)
Gene ID: HRGMv2_4197_7_17
Type: STP
Location: 14892 - 15548 (+)
Gene ID: HRGMv2_4197_7_18
Type: pfam
Location: 15536 - 16696 (+)
Gene ID: HRGMv2_4197_7_19
Type: CAZyme
Location: 16828 - 18657 (+)
Gene ID: HRGMv2_4197_7_20
Type: CAZyme
Location: 18672 - 21083 (+)
Gene ID: HRGMv2_4197_7_21
Type: CAZyme
Location: 21119 - 23239 (+)
Gene ID: HRGMv2_4197_7_22
Type: TC
Location: 23243 - 25546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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