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Cluster: HRGMv2_4197_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_28 28309 29121 - GT111
TC HRGMv2_4197_6 HRGMv2_4197_6_29 29121 31205 - 9.B.18.1.2
TC HRGMv2_4197_6 HRGMv2_4197_6_30 31316 32770 - 2.A.66.2.16
NULL(UNKNOWN) HRGMv2_4197_6 HRGMv2_4197_6_31 32797 33954 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4197_6 HRGMv2_4197_6_32 33954 35330 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_33 35353 36333 - GT2
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_34 36330 37478 - GT4
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_35 37475 38539 - GT113
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_36 38539 39654 - GT4
CAZyme HRGMv2_4197_6 HRGMv2_4197_6_37 39667 40635 - GT2
Gene ID: HRGMv2_4197_6_28
Type: CAZyme
Location: 28309 - 29121 (-)
Gene ID: HRGMv2_4197_6_29
Type: TC
Location: 29121 - 31205 (-)
Gene ID: HRGMv2_4197_6_30
Type: TC
Location: 31316 - 32770 (-)
Gene ID: HRGMv2_4197_6_31
Type:
Location: 32797 - 33954 (-)
Gene ID: HRGMv2_4197_6_32
Type:
Location: 33954 - 35330 (-)
Gene ID: HRGMv2_4197_6_33
Type: CAZyme
Location: 35353 - 36333 (-)
Gene ID: HRGMv2_4197_6_34
Type: CAZyme
Location: 36330 - 37478 (-)
Gene ID: HRGMv2_4197_6_35
Type: CAZyme
Location: 37475 - 38539 (-)
Gene ID: HRGMv2_4197_6_36
Type: CAZyme
Location: 38539 - 39654 (-)
Gene ID: HRGMv2_4197_6_37
Type: CAZyme
Location: 39667 - 40635 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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