Cluster: HRGMv2_4192_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4192_5 | HRGMv2_4192_5_1 | 3 | 5225 | - | CBM32 |
| NULL(UNKNOWN) | HRGMv2_4192_5 | HRGMv2_4192_5_2 | 5827 | 6192 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4192_5 | HRGMv2_4192_5_3 | 6207 | 6632 | + | NfeD |
| TC | HRGMv2_4192_5 | HRGMv2_4192_5_4 | 6646 | 7557 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_4192_5_1
Type: CAZyme
Location: 3 - 5225 (-)
Type: CAZyme
Location: 3 - 5225 (-)
Gene ID: HRGMv2_4192_5_2
Type:
Location: 5827 - 6192 (+)
Type:
Location: 5827 - 6192 (+)
Gene ID: HRGMv2_4192_5_3
Type: pfam
Location: 6207 - 6632 (+)
Type: pfam
Location: 6207 - 6632 (+)
Gene ID: HRGMv2_4192_5_4
Type: TC
Location: 6646 - 7557 (+)
Type: TC
Location: 6646 - 7557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4192_5_4 | vegetarian > omnivore | 1.85474 | 0.04420 |