Cluster: HRGMv2_4192_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- CGC Family ID: CGCFAM_01864
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4192_105 | HRGMv2_4192_105_3 | 1300 | 3312 | + | 9.A.8.1.6 |
| pfam | HRGMv2_4192_105 | HRGMv2_4192_105_4 | 3362 | 4003 | + | LUD_dom |
| CAZyme | HRGMv2_4192_105 | HRGMv2_4192_105_5 | 4005 | 5420 | + | GH77 |
Gene ID: HRGMv2_4192_105_3
Type: TC
Location: 1300 - 3312 (+)
Type: TC
Location: 1300 - 3312 (+)
Gene ID: HRGMv2_4192_105_4
Type: pfam
Location: 3362 - 4003 (+)
Type: pfam
Location: 3362 - 4003 (+)
Gene ID: HRGMv2_4192_105_5
Type: CAZyme
Location: 4005 - 5420 (+)
Type: CAZyme
Location: 4005 - 5420 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.