Cluster: HRGMv2_4192_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4192_102 | HRGMv2_4192_102_3 | 2140 | 2655 | - | 2.A.87.3.3 |
| pfam | HRGMv2_4192_102 | HRGMv2_4192_102_4 | 2639 | 2998 | - | NusG_II |
| pfam | HRGMv2_4192_102 | HRGMv2_4192_102_5 | 3037 | 4014 | + | ApbE |
| CAZyme | HRGMv2_4192_102 | HRGMv2_4192_102_6 | 4603 | 6480 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_4192_102 | HRGMv2_4192_102_7 | 6492 | 8402 | + | GT35 |
Gene ID: HRGMv2_4192_102_3
Type: TC
Location: 2140 - 2655 (-)
Type: TC
Location: 2140 - 2655 (-)
Gene ID: HRGMv2_4192_102_4
Type: pfam
Location: 2639 - 2998 (-)
Type: pfam
Location: 2639 - 2998 (-)
Gene ID: HRGMv2_4192_102_5
Type: pfam
Location: 3037 - 4014 (+)
Type: pfam
Location: 3037 - 4014 (+)
Gene ID: HRGMv2_4192_102_6
Type: CAZyme
Location: 4603 - 6480 (+)
Type: CAZyme
Location: 4603 - 6480 (+)
Gene ID: HRGMv2_4192_102_7
Type: CAZyme
Location: 6492 - 8402 (+)
Type: CAZyme
Location: 6492 - 8402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.