Cluster: HRGMv2_4192_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4192_85 | HRGMv2_4192_85_3 | 1059 | 2621 | - | 2.A.49.5.1 |
| TF | HRGMv2_4192_85 | HRGMv2_4192_85_4 | 2697 | 3203 | + | MarR |
| pfam | HRGMv2_4192_85 | HRGMv2_4192_85_5 | 3326 | 3955 | - | Pribosyltran |
| TC | HRGMv2_4192_85 | HRGMv2_4192_85_6 | 3922 | 5028 | - | 3.A.11.1.1 |
| TF | HRGMv2_4192_85 | HRGMv2_4192_85_7 | 5297 | 5494 | + | CSD |
| CAZyme | HRGMv2_4192_85 | HRGMv2_4192_85_8 | 5671 | 10758 | + | CBM51 | GH110 |
Gene ID: HRGMv2_4192_85_3
Type: TC
Location: 1059 - 2621 (-)
Type: TC
Location: 1059 - 2621 (-)
Gene ID: HRGMv2_4192_85_4
Type: TF
Location: 2697 - 3203 (+)
Type: TF
Location: 2697 - 3203 (+)
Gene ID: HRGMv2_4192_85_5
Type: pfam
Location: 3326 - 3955 (-)
Type: pfam
Location: 3326 - 3955 (-)
Gene ID: HRGMv2_4192_85_6
Type: TC
Location: 3922 - 5028 (-)
Type: TC
Location: 3922 - 5028 (-)
Gene ID: HRGMv2_4192_85_7
Type: TF
Location: 5297 - 5494 (+)
Type: TF
Location: 5297 - 5494 (+)
Gene ID: HRGMv2_4192_85_8
Type: CAZyme
Location: 5671 - 10758 (+)
Type: CAZyme
Location: 5671 - 10758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.