Cluster: HRGMv2_4192_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- CGC Family ID: CGCFAM_09225
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4192_2 | HRGMv2_4192_2_30 | 28975 | 29856 | - | 3.A.1.126.1 |
| TC | HRGMv2_4192_2 | HRGMv2_4192_2_31 | 29955 | 30647 | - | 2.A.122.1.4 |
| TC | HRGMv2_4192_2 | HRGMv2_4192_2_32 | 30640 | 31002 | - | 1.E.14.1.1 |
| peptidase | HRGMv2_4192_2 | HRGMv2_4192_2_33 | 31089 | 32438 | - | C40.UPW |
| peptidase | HRGMv2_4192_2 | HRGMv2_4192_2_34 | 32583 | 33785 | - | C40.UPW |
| CAZyme | HRGMv2_4192_2 | HRGMv2_4192_2_35 | 33974 | 35002 | + | GH25 |
Gene ID: HRGMv2_4192_2_30
Type: TC
Location: 28975 - 29856 (-)
Type: TC
Location: 28975 - 29856 (-)
Gene ID: HRGMv2_4192_2_31
Type: TC
Location: 29955 - 30647 (-)
Type: TC
Location: 29955 - 30647 (-)
Gene ID: HRGMv2_4192_2_32
Type: TC
Location: 30640 - 31002 (-)
Type: TC
Location: 30640 - 31002 (-)
Gene ID: HRGMv2_4192_2_33
Type: peptidase
Location: 31089 - 32438 (-)
Type: peptidase
Location: 31089 - 32438 (-)
Gene ID: HRGMv2_4192_2_34
Type: peptidase
Location: 32583 - 33785 (-)
Type: peptidase
Location: 32583 - 33785 (-)
Gene ID: HRGMv2_4192_2_35
Type: CAZyme
Location: 33974 - 35002 (+)
Type: CAZyme
Location: 33974 - 35002 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.