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Cluster: HRGMv2_4192_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4192_75 HRGMv2_4192_75_8 5537 6166 + 9.B.18.1.2
pfam HRGMv2_4192_75 HRGMv2_4192_75_9 6163 7131 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
CAZyme HRGMv2_4192_75 HRGMv2_4192_75_10 7137 8309 + GT4
CAZyme HRGMv2_4192_75 HRGMv2_4192_75_11 8312 9112 + GT2
CAZyme HRGMv2_4192_75 HRGMv2_4192_75_12 9137 9862 + GT32
CAZyme HRGMv2_4192_75 HRGMv2_4192_75_13 9852 10736 + GT2
pfam HRGMv2_4192_75 HRGMv2_4192_75_14 10733 11848 + Wzy_C
CAZyme HRGMv2_4192_75 HRGMv2_4192_75_15 11832 12737 + GT2
Gene ID: HRGMv2_4192_75_8
Type: TC
Location: 5537 - 6166 (+)
Gene ID: HRGMv2_4192_75_9
Type: pfam
Location: 6163 - 7131 (+)
Gene ID: HRGMv2_4192_75_10
Type: CAZyme
Location: 7137 - 8309 (+)
Gene ID: HRGMv2_4192_75_11
Type: CAZyme
Location: 8312 - 9112 (+)
Gene ID: HRGMv2_4192_75_12
Type: CAZyme
Location: 9137 - 9862 (+)
Gene ID: HRGMv2_4192_75_13
Type: CAZyme
Location: 9852 - 10736 (+)
Gene ID: HRGMv2_4192_75_14
Type: pfam
Location: 10733 - 11848 (+)
Gene ID: HRGMv2_4192_75_15
Type: CAZyme
Location: 11832 - 12737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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