Cluster: HRGMv2_4192_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- CGC Family ID: CGCFAM_00384
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4192_59 | HRGMv2_4192_59_1 | 2 | 2815 | - | GH3 |
| TC | HRGMv2_4192_59 | HRGMv2_4192_59_2 | 2958 | 4352 | - | 3.A.5.1.1 |
| TF | HRGMv2_4192_59 | HRGMv2_4192_59_3 | 4365 | 4694 | - | 0040266 |
| TC | HRGMv2_4192_59 | HRGMv2_4192_59_4 | 4696 | 5679 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_4192_59_1
Type: CAZyme
Location: 2 - 2815 (-)
Type: CAZyme
Location: 2 - 2815 (-)
Gene ID: HRGMv2_4192_59_2
Type: TC
Location: 2958 - 4352 (-)
Type: TC
Location: 2958 - 4352 (-)
Gene ID: HRGMv2_4192_59_3
Type: TF
Location: 4365 - 4694 (-)
Type: TF
Location: 4365 - 4694 (-)
Gene ID: HRGMv2_4192_59_4
Type: TC
Location: 4696 - 5679 (-)
Type: TC
Location: 4696 - 5679 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.