Cluster: HRGMv2_4192_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4192
- CGC Family ID: CGCFAM_00852
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4192_1 | HRGMv2_4192_1_100 | 107240 | 111103 | + | GH3 |
| peptidase | HRGMv2_4192_1 | HRGMv2_4192_1_101 | 111477 | 112964 | + | S09.UPD |
| pfam | HRGMv2_4192_1 | HRGMv2_4192_1_102 | 113837 | 114250 | + | Ribosomal_L11 | Ribosomal_L11_N |
| TC | HRGMv2_4192_1 | HRGMv2_4192_1_103 | 114318 | 115004 | + | 1.C.82.1.1 |
Gene ID: HRGMv2_4192_1_100
Type: CAZyme
Location: 107240 - 111103 (+)
Type: CAZyme
Location: 107240 - 111103 (+)
Gene ID: HRGMv2_4192_1_101
Type: peptidase
Location: 111477 - 112964 (+)
Type: peptidase
Location: 111477 - 112964 (+)
Gene ID: HRGMv2_4192_1_102
Type: pfam
Location: 113837 - 114250 (+)
Type: pfam
Location: 113837 - 114250 (+)
Gene ID: HRGMv2_4192_1_103
Type: TC
Location: 114318 - 115004 (+)
Type: TC
Location: 114318 - 115004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4192_1_103 | vegan > omnivore | 1.47088 | 0.00524 |