Cluster: HRGMv2_4192_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4192
- CGC Family ID: CGCFAM_00191
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4192_30 | HRGMv2_4192_30_1 | 2 | 4579 | - | CBM32 |
| pfam | HRGMv2_4192_30 | HRGMv2_4192_30_2 | 5553 | 5837 | - | YajC |
| TC | HRGMv2_4192_30 | HRGMv2_4192_30_3 | 5841 | 6275 | - | 4.A.6.1.16 |
| STP | HRGMv2_4192_30 | HRGMv2_4192_30_4 | 6281 | 7468 | - | SIS | SIS |
| CAZyme | HRGMv2_4192_30 | HRGMv2_4192_30_5 | 7736 | 8887 | + | CE9 |
Gene ID: HRGMv2_4192_30_1
Type: CAZyme
Location: 2 - 4579 (-)
Type: CAZyme
Location: 2 - 4579 (-)
Gene ID: HRGMv2_4192_30_2
Type: pfam
Location: 5553 - 5837 (-)
Type: pfam
Location: 5553 - 5837 (-)
Gene ID: HRGMv2_4192_30_3
Type: TC
Location: 5841 - 6275 (-)
Type: TC
Location: 5841 - 6275 (-)
Gene ID: HRGMv2_4192_30_4
Type: STP
Location: 6281 - 7468 (-)
Type: STP
Location: 6281 - 7468 (-)
Gene ID: HRGMv2_4192_30_5
Type: CAZyme
Location: 7736 - 8887 (+)
Type: CAZyme
Location: 7736 - 8887 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.