Cluster: HRGMv2_4192_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4192_11 | HRGMv2_4192_11_9 | 7695 | 11402 | - | CBM32 | CBM32 |
| CAZyme | HRGMv2_4192_11 | HRGMv2_4192_11_10 | 11472 | 12785 | - | PL8 |
| pfam | HRGMv2_4192_11 | HRGMv2_4192_11_11 | 12873 | 13745 | - | Lyase_8_N |
| NULL(UNKNOWN) | HRGMv2_4192_11 | HRGMv2_4192_11_12 | 14337 | 14657 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4192_11 | HRGMv2_4192_11_13 | 14792 | 16936 | + | 3.A.1.122.3 |
| TC | HRGMv2_4192_11 | HRGMv2_4192_11_14 | 16938 | 18722 | + | 3.A.1.134.1 |
Gene ID: HRGMv2_4192_11_9
Type: CAZyme
Location: 7695 - 11402 (-)
Type: CAZyme
Location: 7695 - 11402 (-)
Gene ID: HRGMv2_4192_11_10
Type: CAZyme
Location: 11472 - 12785 (-)
Type: CAZyme
Location: 11472 - 12785 (-)
Gene ID: HRGMv2_4192_11_11
Type: pfam
Location: 12873 - 13745 (-)
Type: pfam
Location: 12873 - 13745 (-)
Gene ID: HRGMv2_4192_11_12
Type:
Location: 14337 - 14657 (+)
Type:
Location: 14337 - 14657 (+)
Gene ID: HRGMv2_4192_11_13
Type: TC
Location: 14792 - 16936 (+)
Type: TC
Location: 14792 - 16936 (+)
Gene ID: HRGMv2_4192_11_14
Type: TC
Location: 16938 - 18722 (+)
Type: TC
Location: 16938 - 18722 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp021770925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.