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Cluster: HRGMv2_4189_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_71 HRGMv2_4189_71_7 9464 10051 - 9.B.29.3.1
TC HRGMv2_4189_71 HRGMv2_4189_71_8 10205 10777 + 9.B.27.2.7
TC HRGMv2_4189_71 HRGMv2_4189_71_9 10822 11502 - 1.B.35.1.5
TC HRGMv2_4189_71 HRGMv2_4189_71_10 11836 13278 - 1.B.17.3.10
pfam HRGMv2_4189_71 HRGMv2_4189_71_11 13411 14145 + Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_4189_71 HRGMv2_4189_71_12 14240 15634 - GH1
TC HRGMv2_4189_71 HRGMv2_4189_71_13 15650 17503 - 4.A.1.2.2
Gene ID: HRGMv2_4189_71_7
Type: TC
Location: 9464 - 10051 (-)
Gene ID: HRGMv2_4189_71_8
Type: TC
Location: 10205 - 10777 (+)
Gene ID: HRGMv2_4189_71_9
Type: TC
Location: 10822 - 11502 (-)
Gene ID: HRGMv2_4189_71_10
Type: TC
Location: 11836 - 13278 (-)
Gene ID: HRGMv2_4189_71_11
Type: pfam
Location: 13411 - 14145 (+)
Gene ID: HRGMv2_4189_71_12
Type: CAZyme
Location: 14240 - 15634 (-)
Gene ID: HRGMv2_4189_71_13
Type: TC
Location: 15650 - 17503 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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