dbCAN Logo

Cluster: HRGMv2_4189_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_65 HRGMv2_4189_65_1 91 1101 - 3.A.1.2.3
TC HRGMv2_4189_65 HRGMv2_4189_65_2 1117 2637 - 3.A.1.2.3
TC HRGMv2_4189_65 HRGMv2_4189_65_3 2712 3710 - 3.A.1.2.3
TF HRGMv2_4189_65 HRGMv2_4189_65_4 4002 5024 - LacI
TC HRGMv2_4189_65 HRGMv2_4189_65_5 5182 6339 - 9.B.169.1.2
pfam HRGMv2_4189_65 HRGMv2_4189_65_6 6361 7029 - GTP_cyclohydroI
TC HRGMv2_4189_65 HRGMv2_4189_65_7 7145 8278 - 2.A.1.51.4
peptidase HRGMv2_4189_65 HRGMv2_4189_65_8 8417 9253 + S09.UPW
TF HRGMv2_4189_65 HRGMv2_4189_65_9 9326 10201 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4189_65 HRGMv2_4189_65_10 10521 12170 + GH154
TC HRGMv2_4189_65 HRGMv2_4189_65_11 12202 13467 + 2.A.1.5.4
CAZyme HRGMv2_4189_65 HRGMv2_4189_65_12 13486 14679 + GH88
TC HRGMv2_4189_65 HRGMv2_4189_65_13 14773 16740 - 1.B.14.1.4
TC HRGMv2_4189_65 HRGMv2_4189_65_14 17035 18504 - 2.A.3.1.2
Gene ID: HRGMv2_4189_65_1
Type: TC
Location: 91 - 1101 (-)
Gene ID: HRGMv2_4189_65_2
Type: TC
Location: 1117 - 2637 (-)
Gene ID: HRGMv2_4189_65_3
Type: TC
Location: 2712 - 3710 (-)
Gene ID: HRGMv2_4189_65_4
Type: TF
Location: 4002 - 5024 (-)
Gene ID: HRGMv2_4189_65_5
Type: TC
Location: 5182 - 6339 (-)
Gene ID: HRGMv2_4189_65_6
Type: pfam
Location: 6361 - 7029 (-)
Gene ID: HRGMv2_4189_65_7
Type: TC
Location: 7145 - 8278 (-)
Gene ID: HRGMv2_4189_65_8
Type: peptidase
Location: 8417 - 9253 (+)
Gene ID: HRGMv2_4189_65_9
Type: TF
Location: 9326 - 10201 (-)
Gene ID: HRGMv2_4189_65_10
Type: CAZyme
Location: 10521 - 12170 (+)
Gene ID: HRGMv2_4189_65_11
Type: TC
Location: 12202 - 13467 (+)
Gene ID: HRGMv2_4189_65_12
Type: CAZyme
Location: 13486 - 14679 (+)
Gene ID: HRGMv2_4189_65_13
Type: TC
Location: 14773 - 16740 (-)
Gene ID: HRGMv2_4189_65_14
Type: TC
Location: 17035 - 18504 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List