Cluster: HRGMv2_4189_CGC76
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4189
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4189_58 | HRGMv2_4189_58_18 | 12968 | 13423 | + | 4.A.2.1.11 |
| TC | HRGMv2_4189_58 | HRGMv2_4189_58_19 | 13426 | 13749 | + | 4.A.2.1.10 |
| TC | HRGMv2_4189_58 | HRGMv2_4189_58_20 | 13763 | 14866 | + | 4.A.2.1.15 |
| CAZyme | HRGMv2_4189_58 | HRGMv2_4189_58_21 | 14897 | 17530 | + | GH38 |
| TF | HRGMv2_4189_58 | HRGMv2_4189_58_22 | 17541 | 19451 | + | HTH_11 | Mga |
| TC | HRGMv2_4189_58 | HRGMv2_4189_58_23 | 19542 | 20714 | + | 1.B.15.1.1 |
Gene ID: HRGMv2_4189_58_18
Type: TC
Location: 12968 - 13423 (+)
Type: TC
Location: 12968 - 13423 (+)
Gene ID: HRGMv2_4189_58_19
Type: TC
Location: 13426 - 13749 (+)
Type: TC
Location: 13426 - 13749 (+)
Gene ID: HRGMv2_4189_58_20
Type: TC
Location: 13763 - 14866 (+)
Type: TC
Location: 13763 - 14866 (+)
Gene ID: HRGMv2_4189_58_21
Type: CAZyme
Location: 14897 - 17530 (+)
Type: CAZyme
Location: 14897 - 17530 (+)
Gene ID: HRGMv2_4189_58_22
Type: TF
Location: 17541 - 19451 (+)
Type: TF
Location: 17541 - 19451 (+)
Gene ID: HRGMv2_4189_58_23
Type: TC
Location: 19542 - 20714 (+)
Type: TC
Location: 19542 - 20714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera georgiana
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.